DNA

Part:BBa_K4438706

Designed by: Shreyas Samir Parkhie   Group: iGEM22_IISER-Tirupati_India   (2022-10-12)

P4G13_Target_3

P4G13_Target_3 (<partsinfo>BBa_K4438706</partsinfo>) is a single-stranded DNA sequence having 82 nucleotides. Figure 1C) shows the secondary structure and minimum free energy. Its 3’ end has few bases complementary to P4G13_trigger_3_w/oPol (<partsinfo>BBa_K4438705</partsinfo>). In the middle complete ssDNA antisense T7 promoter sequence is present. The 5’ end has broccoli cDNA sequence.

Usage and Biology

This part along with P4G13_trigger_3_w/oPol (<partsinfo>BBa_K4438705</partsinfo>) and P4G13_aptamer (<partsinfo>BBa_K4438700</partsinfo>) can be used for sensing different concentrations of progesterone [1]. T--IISER-Tirupati India--Pg413 3.png


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


References

Contreras Jiménez, G., Eissa, S., Ng, A., Alhadrami, H., Zourob, M., & Siaj, M. (2015). Aptamer-based label-free impedimetric biosensor for detection of progesterone. Analytical chemistry, 87(2), 1075-1082.

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